The group discussed the roles of colors in cell architecture visualization and concluded that colors can be used as ontology. A color ontology highlights the notions in knowledge as a tree-like structure so that the relation of the notions and the hierarchic structure are clarified. The meaning of cell architecture vi- sualization can be considered as a kind of encoding-decoding communication model between a writer and a reader through a picture with palettes (textures) and a symbolic color such as “a microtubule is green”. In the framework, color ontology plays an essential role in reducing the complexity of images with re- gards to information entropy; high in grayscale, low in black/white, and colored in the middle
Konagaya, A., Ferrara, C., Inoue, D., Fan, H., Chen, M., Artese, M.T., et al. (2025). Rules for Color Representation in Ex- pressing Cell Structure. In Colors and Visualization Strategies in Structural and Cellular Biology (pp. 31-35). Tokyo : National Institute of Informatics.
Rules for Color Representation in Ex- pressing Cell Structure
Ferrara, Cinzia;
2025-01-01
Abstract
The group discussed the roles of colors in cell architecture visualization and concluded that colors can be used as ontology. A color ontology highlights the notions in knowledge as a tree-like structure so that the relation of the notions and the hierarchic structure are clarified. The meaning of cell architecture vi- sualization can be considered as a kind of encoding-decoding communication model between a writer and a reader through a picture with palettes (textures) and a symbolic color such as “a microtubule is green”. In the framework, color ontology plays an essential role in reducing the complexity of images with re- gards to information entropy; high in grayscale, low in black/white, and colored in the middle| File | Dimensione | Formato | |
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