Nonsense mutations are single-nucleotide substitutions that convert sense codons into premature termination codons (PTCs), resulting in truncated, non-functional proteins. These mutations contribute to approximately 11% of all genetic disorders and affect nearly 12% of tumor suppressor genes, including TP53, one of the most frequently mutated genes in human cancers [1]. The TP53 gene encodes the tumor suppressor protein p53, a central regulator of cell cycle arrest, apoptosis, and genomic stability. Notably, around 10% of TP53 mutations are classified as nonsense mutations, underscoring the need for targeted therapeutic interventions [2]. Translational readthrough (RT)-based therapy represents a promising strategy to restore protein function by promoting the bypass of PTCs during translation. This approach employs small molecules known as translational readthrough-inducing drugs (TRIDs) to facilitate the synthesis of full-length, functional proteins. The tRNA-specific 2′-O-methyltransferase FTSJ1, which catalyzes the methylation of cytosine 34 in tRNA^Trp and influences the decoding of UGA stop codons, has recently emerged as a regulatory node in translation and a potential therapeutic target in oncology [3]. In this study, we identified novel chemical scaffolds capable of enhancing translational readthrough of nonsense-mutated TP53 by selectively targeting FTSJ1. We implemented a structure-based virtual screening workflow integrating molecular docking, binding pose metadynamics, MM-GBSA free energy estimations, and molecular dynamics simulations to prioritize candidate TRIDs. The top-ranked compounds were subsequently evaluated in vitro for their capacity to restore full-length p53 protein expression. Our findings highlight the therapeutic potential of FTSJ1-targeting TRIDs as a novel class of agents for the treatment of cancers harboring TP53 nonsense mutations.

Roomi, M.S., Culletta, G., Menditto, M., Ricci, D., Varrica, R., Lentini, L., et al. (2025). FTSJ1 INHIBITION AS A STRATEGY FOR NONSENSE MUTATION SUPPRESSION IN TP53: INTEGRATIVE COMPUTATIONAL AND EXPERIMENTAL ANALYSIS. In XXIX National Meeting on Medicinal Chemistry - Book of Abstract.

FTSJ1 INHIBITION AS A STRATEGY FOR NONSENSE MUTATION SUPPRESSION IN TP53: INTEGRATIVE COMPUTATIONAL AND EXPERIMENTAL ANALYSIS

Roomi M. S.;Culletta G.;Menditto M.;Ricci D.;Varrica R.;Lentini L.;Pibiri I.;Almerico A. M.
;
Tutone M.
2025-01-01

Abstract

Nonsense mutations are single-nucleotide substitutions that convert sense codons into premature termination codons (PTCs), resulting in truncated, non-functional proteins. These mutations contribute to approximately 11% of all genetic disorders and affect nearly 12% of tumor suppressor genes, including TP53, one of the most frequently mutated genes in human cancers [1]. The TP53 gene encodes the tumor suppressor protein p53, a central regulator of cell cycle arrest, apoptosis, and genomic stability. Notably, around 10% of TP53 mutations are classified as nonsense mutations, underscoring the need for targeted therapeutic interventions [2]. Translational readthrough (RT)-based therapy represents a promising strategy to restore protein function by promoting the bypass of PTCs during translation. This approach employs small molecules known as translational readthrough-inducing drugs (TRIDs) to facilitate the synthesis of full-length, functional proteins. The tRNA-specific 2′-O-methyltransferase FTSJ1, which catalyzes the methylation of cytosine 34 in tRNA^Trp and influences the decoding of UGA stop codons, has recently emerged as a regulatory node in translation and a potential therapeutic target in oncology [3]. In this study, we identified novel chemical scaffolds capable of enhancing translational readthrough of nonsense-mutated TP53 by selectively targeting FTSJ1. We implemented a structure-based virtual screening workflow integrating molecular docking, binding pose metadynamics, MM-GBSA free energy estimations, and molecular dynamics simulations to prioritize candidate TRIDs. The top-ranked compounds were subsequently evaluated in vitro for their capacity to restore full-length p53 protein expression. Our findings highlight the therapeutic potential of FTSJ1-targeting TRIDs as a novel class of agents for the treatment of cancers harboring TP53 nonsense mutations.
2025
Roomi, M.S., Culletta, G., Menditto, M., Ricci, D., Varrica, R., Lentini, L., et al. (2025). FTSJ1 INHIBITION AS A STRATEGY FOR NONSENSE MUTATION SUPPRESSION IN TP53: INTEGRATIVE COMPUTATIONAL AND EXPERIMENTAL ANALYSIS. In XXIX National Meeting on Medicinal Chemistry - Book of Abstract.
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/10447/690326
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